BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D10LP1|AL426519
(841 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1470 1599 0.0
>3x_Contig1470
Length = 8270
Score = 1599 bits (804), Expect = 0.0
Identities = 835/844 (98%), Gaps = 3/844 (0%)
Strand = Plus / Minus
Query: 1 gatcagaggagttgttctcctcattccaggtgggaaattcggtggaacgcagctgttcgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5523 gatcagaggagttgttctcctcattccaggtgggaaattcggtggaacgcagctgtccgc 5464
Query: 61 tcgccgagggttcaaacccccggtgagttataatcaagcaaatccctaacgggattttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5463 tcgccgagggttcaaacccccggtgagttataatcaagcaaatccctaacgggattttcg 5404
Query: 121 cttcgtgagaaggttgtttctaatggaacttcagcttgagccctattgtcgttgttataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5403 cttcgtgagaaggttgtttctaatggaacttcagcttgagccctattgtcgttgttataa 5344
Query: 181 taaatcaagtcgccagttcttctctaatggagaccacgtgacaagggagggacaacggac 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5343 taaatcaagtcgccagttcttctctaatggagaccacgtgacatgggagggacaacggac 5284
Query: 241 ggacagtttagcttgtcatttacgacaatgcctagttgagtgcaatgcagggagtctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5283 ggacagtttagcttgtcatttacgacaatgcctagttgagtgcaatgcagggagtctgca 5224
Query: 301 acttacgcagataacacaataccgattaccttgtgtctgaggagcatctttttttggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5223 acttacgcagataacacaataccgattaccttgtgtctgaggagcatctttttttggcca 5164
Query: 361 gtcatatggcaatgaaatgcaaaccttt-ctatatacagaaacagaatgaatatacatgg 419
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5163 gtcatatggcaatgaaatgcaaaccttttctatatacagaaacagaatgaatatacatgg 5104
Query: 420 gagagatagtccttaaaawctatggtaatcgtagtagctacgataaaatgttatgatata 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5103 gagagatagtccttaaaatctatggtaatcgtagtagctacgataaaatgttatgatata 5044
Query: 480 atgttataatataatgttataatataawgaagtatgtacagaataaaawttgaggttggt 539
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 5043 atgttataatataatgttataatataatgaagtatgtacagaataaaatttgaggttggt 4984
Query: 540 agggagaatttcttctttaaaccttttaacgacccatggtttgattcatggcagcatttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4983 agggagaatttcttctttaaaccttttaacgacccatggtttgattcatggcagcatttt 4924
Query: 600 gctcttggaaacgttgacccacacgttcactgtgtttcaagaacttttctgaacatctca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4923 gctcttggaaacgttgacccacacgttcactgtgtttcaagaacttttctgaacatctca 4864
Query: 660 ttatacagttttgttccttagaagtaagcttagcggatgtgaagtcgttgacacagtcgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4863 ttatacagttttgttccttagaagtaagcttagcggatgtgaagtcgttgacacagtcgc 4804
Query: 720 tgaaacatctttcgaccaagttggagtatagacgcatgaaatccttcatttgcttttgtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4803 tgaaacatctttcgaccaagttggagtatagacgcatgaaatccttcatttgcttttgtt 4744
Query: 780 -cacgattttttgg-amtcttgttgttccttaccattaagttgatccattgtgtgcttgc 837
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4743 ccacgattttttggaactcttgttgttccttaccattaagttgatccattgtgtgcttgc 4684
Query: 838 ttct 841
||||
Sbjct: 4683 ttct 4680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5391
Number of Sequences: 1807
Number of extensions: 5391
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 841
length of database: 10,358,551
effective HSP length: 16
effective length of query: 825
effective length of database: 10,329,639
effective search space: 8521952175
effective search space used: 8521952175
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)